Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TUBB4AP04350 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TUBB4AP04350 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TUBB4AP04350 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TUBB4AP04350 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TUBB4AP04350 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBB4AP04350 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBB4AP04350 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBB4AP04350 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TUBB4AP04350 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TUBB4AP04350 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBB4AP04350 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.4■□□□□ 0.54
TUBB4AP04350 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.4■□□□□ 0.54
TUBB4AP04350 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TUBB4AP04350 GPR89P-201ENST00000407924 1495 ntBASIC18.39■□□□□ 0.54
TUBB4AP04350 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TUBB4AP04350 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TUBB4AP04350 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB4AP04350 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB4AP04350 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB4AP04350 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB4AP04350 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB4AP04350 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB4AP04350 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.39■□□□□ 0.53
TUBB4AP04350 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.39■□□□□ 0.53
TUBB4AP04350 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TUBB4AP04350 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.39■□□□□ 0.53
TUBB4AP04350 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.39■□□□□ 0.53
TUBB4AP04350 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB4AP04350 AC024243.1-201ENST00000609234 778 ntBASIC18.39■□□□□ 0.53
TUBB4AP04350 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.39■□□□□ 0.53
TUBB4AP04350 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB4AP04350 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.39■□□□□ 0.53
TUBB4AP04350 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB4AP04350 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TUBB4AP04350 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB4AP04350 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.39■□□□□ 0.53
TUBB4AP04350 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TUBB4AP04350 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB4AP04350 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TUBB4AP04350 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB4AP04350 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB4AP04350 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB4AP04350 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TUBB4AP04350 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.39■□□□□ 0.53
TUBB4AP04350 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TUBB4AP04350 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
TUBB4AP04350 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TUBB4AP04350 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TUBB4AP04350 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TUBB4AP04350 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.38■□□□□ 0.53
TUBB4AP04350 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.38■□□□□ 0.53
TUBB4AP04350 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TUBB4AP04350 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TUBB4AP04350 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.38■□□□□ 0.53
TUBB4AP04350 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.38■□□□□ 0.53
TUBB4AP04350 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.38■□□□□ 0.53
TUBB4AP04350 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.38■□□□□ 0.53
TUBB4AP04350 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 AL603832.2-201ENST00000566195 2125 ntBASIC18.38■□□□□ 0.53
TUBB4AP04350 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TUBB4AP04350 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.38■□□□□ 0.53
TUBB4AP04350 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.38■□□□□ 0.53
TUBB4AP04350 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TUBB4AP04350 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB4AP04350 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.38■□□□□ 0.53
TUBB4AP04350 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.38■□□□□ 0.53
TUBB4AP04350 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB4AP04350 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.37■□□□□ 0.53
TUBB4AP04350 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB4AP04350 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB4AP04350 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB4AP04350 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.37■□□□□ 0.53
TUBB4AP04350 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
TUBB4AP04350 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB4AP04350 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB4AP04350 AC068418.2-201ENST00000577309 3703 ntBASIC18.37■□□□□ 0.53
TUBB4AP04350 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB4AP04350 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms