Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 AC103564.2-201ENST00000432853 1299 ntBASIC16.05■□□□□ 0.16
OPN1SWP03999 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.05■□□□□ 0.16
OPN1SWP03999 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.05■□□□□ 0.16
OPN1SWP03999 STK19B-204ENST00000512515 211 ntBASIC16.05■□□□□ 0.16
OPN1SWP03999 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.05■□□□□ 0.16
OPN1SWP03999 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
OPN1SWP03999 RN7SL850P-201ENST00000579959 291 ntBASIC16.05■□□□□ 0.16
OPN1SWP03999 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.05■□□□□ 0.16
OPN1SWP03999 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.05■□□□□ 0.16
OPN1SWP03999 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.05■□□□□ 0.16
OPN1SWP03999 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
OPN1SWP03999 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.05■□□□□ 0.16
OPN1SWP03999 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
OPN1SWP03999 LINC02199-201ENST00000506655 2702 ntBASIC16.05■□□□□ 0.16
OPN1SWP03999 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
OPN1SWP03999 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.05■□□□□ 0.16
OPN1SWP03999 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
OPN1SWP03999 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
OPN1SWP03999 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.05■□□□□ 0.16
OPN1SWP03999 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
OPN1SWP03999 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
OPN1SWP03999 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
OPN1SWP03999 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.04■□□□□ 0.16
OPN1SWP03999 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.04■□□□□ 0.16
OPN1SWP03999 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
OPN1SWP03999 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
OPN1SWP03999 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.04■□□□□ 0.16
OPN1SWP03999 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.04■□□□□ 0.16
OPN1SWP03999 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.04■□□□□ 0.16
OPN1SWP03999 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 DUX4L26-201ENST00000489078 1255 ntBASIC16.04■□□□□ 0.16
OPN1SWP03999 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
OPN1SWP03999 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.04■□□□□ 0.16
OPN1SWP03999 AC090616.6-201ENST00000582640 721 ntBASIC16.04■□□□□ 0.16
OPN1SWP03999 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.04■□□□□ 0.16
OPN1SWP03999 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
OPN1SWP03999 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
OPN1SWP03999 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.04■□□□□ 0.16
OPN1SWP03999 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
OPN1SWP03999 AC009336.1-201ENST00000608941 1553 ntBASIC16.04■□□□□ 0.16
OPN1SWP03999 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.04■□□□□ 0.16
OPN1SWP03999 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.04■□□□□ 0.16
OPN1SWP03999 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
OPN1SWP03999 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
OPN1SWP03999 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
OPN1SWP03999 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPN1SWP03999 AL353593.2-201ENST00000602529 1483 ntBASIC16.03■□□□□ 0.16
OPN1SWP03999 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPN1SWP03999 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPN1SWP03999 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
OPN1SWP03999 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.03■□□□□ 0.16
OPN1SWP03999 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
OPN1SWP03999 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.03■□□□□ 0.16
OPN1SWP03999 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPN1SWP03999 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.03■□□□□ 0.16
OPN1SWP03999 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
OPN1SWP03999 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.03■□□□□ 0.16
OPN1SWP03999 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.03■□□□□ 0.16
OPN1SWP03999 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPN1SWP03999 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
OPN1SWP03999 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
OPN1SWP03999 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
OPN1SWP03999 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.03■□□□□ 0.16
OPN1SWP03999 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
OPN1SWP03999 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPN1SWP03999 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
OPN1SWP03999 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.03■□□□□ 0.16
OPN1SWP03999 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
OPN1SWP03999 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
OPN1SWP03999 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.03■□□□□ 0.16
OPN1SWP03999 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPN1SWP03999 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.03■□□□□ 0.16
OPN1SWP03999 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPN1SWP03999 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.03■□□□□ 0.16
OPN1SWP03999 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
OPN1SWP03999 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPN1SWP03999 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
OPN1SWP03999 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
OPN1SWP03999 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
OPN1SWP03999 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms