Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 AC006538.1-201ENST00000567905 1585 ntBASIC13.61□□□□□ -0.23
IFNA1P01562 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.61□□□□□ -0.23
IFNA1P01562 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
IFNA1P01562 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.61□□□□□ -0.23
IFNA1P01562 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 AL136379.1-201ENST00000623471 2642 ntBASIC13.6□□□□□ -0.23
IFNA1P01562 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
IFNA1P01562 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.6□□□□□ -0.23
IFNA1P01562 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.6□□□□□ -0.23
IFNA1P01562 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
IFNA1P01562 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 AC092384.3-202ENST00000564646 2873 ntBASIC13.6□□□□□ -0.23
IFNA1P01562 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
IFNA1P01562 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
IFNA1P01562 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
IFNA1P01562 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 SLC29A4P1-201ENST00000398760 971 ntBASIC13.6□□□□□ -0.23
IFNA1P01562 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.6□□□□□ -0.23
IFNA1P01562 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.6□□□□□ -0.23
IFNA1P01562 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
IFNA1P01562 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.6□□□□□ -0.23
IFNA1P01562 AP002490.2-201ENST00000524791 560 ntBASIC13.6□□□□□ -0.23
IFNA1P01562 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.6□□□□□ -0.23
IFNA1P01562 MTHFR-217ENST00000641820 1569 ntBASIC13.6□□□□□ -0.23
IFNA1P01562 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
IFNA1P01562 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.6□□□□□ -0.23
IFNA1P01562 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.6□□□□□ -0.23
IFNA1P01562 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.6□□□□□ -0.23
IFNA1P01562 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
IFNA1P01562 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
IFNA1P01562 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
IFNA1P01562 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.6□□□□□ -0.23
IFNA1P01562 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.59□□□□□ -0.23
IFNA1P01562 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.59□□□□□ -0.23
IFNA1P01562 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
IFNA1P01562 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.59□□□□□ -0.23
IFNA1P01562 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
IFNA1P01562 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.59□□□□□ -0.23
IFNA1P01562 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.59□□□□□ -0.23
IFNA1P01562 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
IFNA1P01562 LINC00167-201ENST00000530583 1419 ntBASIC13.59□□□□□ -0.23
IFNA1P01562 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
IFNA1P01562 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
IFNA1P01562 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.59□□□□□ -0.23
IFNA1P01562 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
IFNA1P01562 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.59□□□□□ -0.23
IFNA1P01562 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC13.59□□□□□ -0.23
IFNA1P01562 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
IFNA1P01562 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
IFNA1P01562 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.59□□□□□ -0.23
IFNA1P01562 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
IFNA1P01562 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms