Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE6O95741 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE6O95741 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.86■□□□□ 0.29
CPNE6O95741 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.86■□□□□ 0.29
CPNE6O95741 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CPNE6O95741 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE6O95741 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.85■□□□□ 0.29
CPNE6O95741 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE6O95741 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE6O95741 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE6O95741 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE6O95741 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.85■□□□□ 0.29
CPNE6O95741 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE6O95741 AL391005.1-201ENST00000623953 2435 ntBASIC16.85■□□□□ 0.29
CPNE6O95741 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE6O95741 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE6O95741 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE6O95741 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE6O95741 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE6O95741 STK19B-204ENST00000512515 211 ntBASIC16.85■□□□□ 0.29
CPNE6O95741 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.85■□□□□ 0.29
CPNE6O95741 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.85■□□□□ 0.29
CPNE6O95741 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.85■□□□□ 0.29
CPNE6O95741 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.85■□□□□ 0.29
CPNE6O95741 STK25P1-201ENST00000585406 838 ntBASIC16.85■□□□□ 0.29
CPNE6O95741 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE6O95741 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.85■□□□□ 0.29
CPNE6O95741 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.85■□□□□ 0.29
CPNE6O95741 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE6O95741 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CPNE6O95741 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CPNE6O95741 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE6O95741 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE6O95741 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CPNE6O95741 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CPNE6O95741 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE6O95741 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE6O95741 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CPNE6O95741 AC006504.4-201ENST00000592118 1568 ntBASIC16.85■□□□□ 0.29
CPNE6O95741 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CPNE6O95741 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.85■□□□□ 0.29
CPNE6O95741 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CPNE6O95741 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.84■□□□□ 0.29
CPNE6O95741 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CPNE6O95741 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
CPNE6O95741 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE6O95741 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CPNE6O95741 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CPNE6O95741 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE6O95741 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.84■□□□□ 0.29
CPNE6O95741 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE6O95741 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE6O95741 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE6O95741 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.84■□□□□ 0.29
CPNE6O95741 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE6O95741 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE6O95741 AC055717.3-201ENST00000622967 595 ntBASIC16.84■□□□□ 0.29
CPNE6O95741 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CPNE6O95741 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE6O95741 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CPNE6O95741 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CPNE6O95741 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE6O95741 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE6O95741 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CPNE6O95741 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE6O95741 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.83■□□□□ 0.29
CPNE6O95741 AL162727.3-201ENST00000635661 2787 ntBASIC16.83■□□□□ 0.29
CPNE6O95741 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CPNE6O95741 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
CPNE6O95741 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CPNE6O95741 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE6O95741 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE6O95741 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE6O95741 CRYGEP-201ENST00000412192 528 ntBASIC16.83■□□□□ 0.28
CPNE6O95741 AC023274.1-201ENST00000418278 595 ntBASIC16.83■□□□□ 0.28
CPNE6O95741 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CPNE6O95741 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.83■□□□□ 0.28
CPNE6O95741 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.83■□□□□ 0.28
CPNE6O95741 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE6O95741 AC112482.1-201ENST00000492080 688 ntBASIC16.83■□□□□ 0.28
CPNE6O95741 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE6O95741 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE6O95741 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms