Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH8O95206 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH8O95206 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH8O95206 GNAS-203ENST00000306120 1878 ntBASIC17.1■□□□□ 0.33
PCDH8O95206 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH8O95206 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PCDH8O95206 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH8O95206 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH8O95206 AL513480.1-201ENST00000451731 511 ntBASIC17.1■□□□□ 0.33
PCDH8O95206 ALG1L5P-201ENST00000482043 771 ntBASIC17.1■□□□□ 0.33
PCDH8O95206 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDH8O95206 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH8O95206 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH8O95206 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH8O95206 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH8O95206 C20orf181-201ENST00000623918 480 ntBASIC17.1■□□□□ 0.33
PCDH8O95206 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH8O95206 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH8O95206 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH8O95206 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH8O95206 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDH8O95206 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH8O95206 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH8O95206 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PCDH8O95206 FZD10-202ENST00000539839 3282 ntBASIC17.09■□□□□ 0.33
PCDH8O95206 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH8O95206 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH8O95206 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH8O95206 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDH8O95206 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH8O95206 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH8O95206 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH8O95206 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDH8O95206 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH8O95206 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH8O95206 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH8O95206 HTR5BP-201ENST00000430851 1154 ntBASIC17.09■□□□□ 0.33
PCDH8O95206 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
PCDH8O95206 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.09■□□□□ 0.33
PCDH8O95206 FAM185BP-201ENST00000443595 716 ntBASIC17.09■□□□□ 0.33
PCDH8O95206 AC074386.1-202ENST00000463561 864 ntBASIC17.09■□□□□ 0.33
PCDH8O95206 AC092183.1-201ENST00000469884 875 ntBASIC17.09■□□□□ 0.33
PCDH8O95206 SLC25A6P2-201ENST00000497974 877 ntBASIC17.09■□□□□ 0.33
PCDH8O95206 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH8O95206 AC129492.6-201ENST00000611383 1305 ntBASIC17.09■□□□□ 0.33
PCDH8O95206 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH8O95206 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH8O95206 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH8O95206 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH8O95206 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH8O95206 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PCDH8O95206 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH8O95206 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDH8O95206 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PCDH8O95206 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH8O95206 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDH8O95206 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH8O95206 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
PCDH8O95206 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDH8O95206 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PCDH8O95206 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH8O95206 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH8O95206 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH8O95206 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PCDH8O95206 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDH8O95206 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
PCDH8O95206 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDH8O95206 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDH8O95206 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
PCDH8O95206 MIR4469-201ENST00000583919 79 ntBASIC17.08■□□□□ 0.32
PCDH8O95206 AP001160.2-201ENST00000596071 487 ntBASIC17.08■□□□□ 0.32
PCDH8O95206 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDH8O95206 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDH8O95206 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH8O95206 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH8O95206 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH8O95206 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH8O95206 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH8O95206 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH8O95206 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.07■□□□□ 0.32
PCDH8O95206 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH8O95206 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH8O95206 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDH8O95206 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH8O95206 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH8O95206 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH8O95206 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDH8O95206 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH8O95206 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDH8O95206 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDH8O95206 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDH8O95206 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.07■□□□□ 0.32
PCDH8O95206 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDH8O95206 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH8O95206 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDH8O95206 AL596442.2-201ENST00000610240 980 ntBASIC17.07■□□□□ 0.32
PCDH8O95206 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH8O95206 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.07■□□□□ 0.32
PCDH8O95206 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH8O95206 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms