Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PFDN1O60925 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PFDN1O60925 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PFDN1O60925 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PFDN1O60925 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.3■□□□□ 0.04
PFDN1O60925 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PFDN1O60925 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PFDN1O60925 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
PFDN1O60925 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PFDN1O60925 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PFDN1O60925 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PFDN1O60925 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.3■□□□□ 0.04
PFDN1O60925 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.3■□□□□ 0.04
PFDN1O60925 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PFDN1O60925 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PFDN1O60925 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.3■□□□□ 0.04
PFDN1O60925 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.3■□□□□ 0.04
PFDN1O60925 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.3■□□□□ 0.04
PFDN1O60925 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
PFDN1O60925 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.3■□□□□ 0.04
PFDN1O60925 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PFDN1O60925 AC046185.3-201ENST00000623228 1824 ntBASIC15.3■□□□□ 0.04
PFDN1O60925 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PFDN1O60925 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.3■□□□□ 0.04
PFDN1O60925 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.3■□□□□ 0.04
PFDN1O60925 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PFDN1O60925 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN1O60925 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PFDN1O60925 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.29■□□□□ 0.04
PFDN1O60925 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PFDN1O60925 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.29■□□□□ 0.04
PFDN1O60925 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.29■□□□□ 0.04
PFDN1O60925 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PFDN1O60925 KRT8P9-201ENST00000558927 1449 ntBASIC15.29■□□□□ 0.04
PFDN1O60925 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PFDN1O60925 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.29■□□□□ 0.04
PFDN1O60925 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.29■□□□□ 0.04
PFDN1O60925 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.29■□□□□ 0.04
PFDN1O60925 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.29■□□□□ 0.04
PFDN1O60925 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
PFDN1O60925 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.29■□□□□ 0.04
PFDN1O60925 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PFDN1O60925 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PFDN1O60925 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PFDN1O60925 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PFDN1O60925 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.29■□□□□ 0.04
PFDN1O60925 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 AC041040.2-201ENST00000622926 2899 ntBASIC15.29■□□□□ 0.04
PFDN1O60925 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.29■□□□□ 0.04
PFDN1O60925 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN1O60925 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.28■□□□□ 0.04
PFDN1O60925 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PFDN1O60925 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms