Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEF4O60810 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.47■□□□□ 0.23
PRAMEF4O60810 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEF4O60810 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEF4O60810 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF4O60810 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEF4O60810 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
PRAMEF4O60810 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PRAMEF4O60810 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
PRAMEF4O60810 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEF4O60810 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEF4O60810 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF4O60810 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF4O60810 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF4O60810 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF4O60810 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF4O60810 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF4O60810 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF4O60810 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF4O60810 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF4O60810 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 HNRNPDP1-201ENST00000439535 754 ntBASIC16.46■□□□□ 0.23
PRAMEF4O60810 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 AC139887.3-201ENST00000568585 713 ntBASIC16.46■□□□□ 0.23
PRAMEF4O60810 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 TERC-201ENST00000602385 541 ntBASIC16.46■□□□□ 0.23
PRAMEF4O60810 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF4O60810 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF4O60810 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF4O60810 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF4O60810 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 AC006504.4-201ENST00000592118 1568 ntBASIC16.46■□□□□ 0.23
PRAMEF4O60810 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF4O60810 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PRAMEF4O60810 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
PRAMEF4O60810 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRAMEF4O60810 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRAMEF4O60810 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
PRAMEF4O60810 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRAMEF4O60810 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRAMEF4O60810 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PRAMEF4O60810 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEF4O60810 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.45■□□□□ 0.22
PRAMEF4O60810 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PRAMEF4O60810 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEF4O60810 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEF4O60810 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.45■□□□□ 0.22
PRAMEF4O60810 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.45■□□□□ 0.22
PRAMEF4O60810 ELK2BP-201ENST00000415014 1224 ntBASIC16.45■□□□□ 0.22
PRAMEF4O60810 AC079781.3-201ENST00000449110 356 ntBASIC16.45■□□□□ 0.22
PRAMEF4O60810 LINC01711-201ENST00000598340 967 ntBASIC16.45■□□□□ 0.22
PRAMEF4O60810 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PRAMEF4O60810 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEF4O60810 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEF4O60810 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.45■□□□□ 0.22
PRAMEF4O60810 PCDHA14-201ENST00000506751 2298 ntBASIC16.45■□□□□ 0.22
PRAMEF4O60810 AC124067.4-201ENST00000519691 2379 ntBASIC16.45■□□□□ 0.22
PRAMEF4O60810 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PRAMEF4O60810 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms