Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KLHL41O60662 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
KLHL41O60662 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
KLHL41O60662 Z83836.1-201ENST00000624605 1642 ntBASIC17.07■□□□□ 0.32
KLHL41O60662 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
KLHL41O60662 BX276092.7-203ENST00000637198 1536 ntBASIC17.06■□□□□ 0.32
KLHL41O60662 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
KLHL41O60662 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
KLHL41O60662 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.06■□□□□ 0.32
KLHL41O60662 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.06■□□□□ 0.32
KLHL41O60662 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.06■□□□□ 0.32
KLHL41O60662 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.06■□□□□ 0.32
KLHL41O60662 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.06■□□□□ 0.32
KLHL41O60662 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.06■□□□□ 0.32
KLHL41O60662 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.06■□□□□ 0.32
KLHL41O60662 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.06■□□□□ 0.32
KLHL41O60662 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.06■□□□□ 0.32
KLHL41O60662 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
KLHL41O60662 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.06■□□□□ 0.32
KLHL41O60662 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.06■□□□□ 0.32
KLHL41O60662 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
KLHL41O60662 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.06■□□□□ 0.32
KLHL41O60662 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.06■□□□□ 0.32
KLHL41O60662 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KLHL41O60662 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
KLHL41O60662 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.06■□□□□ 0.32
KLHL41O60662 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHL41O60662 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KLHL41O60662 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
KLHL41O60662 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHL41O60662 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHL41O60662 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHL41O60662 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHL41O60662 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.05■□□□□ 0.32
KLHL41O60662 RNF216P1-203ENST00000404404 2427 ntBASIC17.05■□□□□ 0.32
KLHL41O60662 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHL41O60662 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHL41O60662 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KLHL41O60662 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHL41O60662 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHL41O60662 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHL41O60662 AL845331.1-201ENST00000424978 1190 ntBASIC17.05■□□□□ 0.32
KLHL41O60662 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.05■□□□□ 0.32
KLHL41O60662 TOB2P1-201ENST00000469761 992 ntBASIC17.05■□□□□ 0.32
KLHL41O60662 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KLHL41O60662 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.05■□□□□ 0.32
KLHL41O60662 AL390719.2-201ENST00000606993 987 ntBASIC17.05■□□□□ 0.32
KLHL41O60662 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.05■□□□□ 0.32
KLHL41O60662 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
KLHL41O60662 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KLHL41O60662 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
KLHL41O60662 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KLHL41O60662 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
KLHL41O60662 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHL41O60662 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.04■□□□□ 0.32
KLHL41O60662 AC092171.3-201ENST00000610122 2651 ntBASIC17.04■□□□□ 0.32
KLHL41O60662 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHL41O60662 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KLHL41O60662 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHL41O60662 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.04■□□□□ 0.32
KLHL41O60662 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KLHL41O60662 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHL41O60662 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
KLHL41O60662 AC092053.1-201ENST00000605787 1936 ntBASIC17.04■□□□□ 0.32
KLHL41O60662 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.04■□□□□ 0.32
KLHL41O60662 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHL41O60662 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHL41O60662 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHL41O60662 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHL41O60662 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
KLHL41O60662 AC005104.2-201ENST00000427818 678 ntBASIC17.04■□□□□ 0.32
KLHL41O60662 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.04■□□□□ 0.32
KLHL41O60662 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KLHL41O60662 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.04■□□□□ 0.32
KLHL41O60662 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.04■□□□□ 0.32
KLHL41O60662 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.04■□□□□ 0.32
KLHL41O60662 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.04■□□□□ 0.32
KLHL41O60662 IFNL4P1-201ENST00000607083 540 ntBASIC17.04■□□□□ 0.32
KLHL41O60662 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.04■□□□□ 0.32
KLHL41O60662 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHL41O60662 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHL41O60662 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms