Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.42■□□□□ 0.22
PRICKLE3O43900 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRICKLE3O43900 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRICKLE3O43900 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.42■□□□□ 0.22
PRICKLE3O43900 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRICKLE3O43900 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.42■□□□□ 0.22
PRICKLE3O43900 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.42■□□□□ 0.22
PRICKLE3O43900 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRICKLE3O43900 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRICKLE3O43900 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PRICKLE3O43900 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRICKLE3O43900 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRICKLE3O43900 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRICKLE3O43900 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRICKLE3O43900 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRICKLE3O43900 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRICKLE3O43900 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRICKLE3O43900 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRICKLE3O43900 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRICKLE3O43900 CRYGEP-201ENST00000412192 528 ntBASIC16.41■□□□□ 0.22
PRICKLE3O43900 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRICKLE3O43900 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRICKLE3O43900 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
PRICKLE3O43900 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRICKLE3O43900 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRICKLE3O43900 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRICKLE3O43900 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRICKLE3O43900 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRICKLE3O43900 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRICKLE3O43900 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRICKLE3O43900 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRICKLE3O43900 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRICKLE3O43900 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRICKLE3O43900 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRICKLE3O43900 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRICKLE3O43900 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRICKLE3O43900 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRICKLE3O43900 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRICKLE3O43900 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRICKLE3O43900 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRICKLE3O43900 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 KRT18P2-201ENST00000447938 1258 ntBASIC16.4■□□□□ 0.22
PRICKLE3O43900 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 MIR4751-201ENST00000578027 74 ntBASIC16.4■□□□□ 0.22
PRICKLE3O43900 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 AC140113.2-201ENST00000604370 208 ntBASIC16.4■□□□□ 0.22
PRICKLE3O43900 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 AC027601.4-201ENST00000611259 610 ntBASIC16.4■□□□□ 0.22
PRICKLE3O43900 FAM197Y3-203ENST00000618346 717 ntBASIC16.4■□□□□ 0.22
PRICKLE3O43900 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRICKLE3O43900 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRICKLE3O43900 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRICKLE3O43900 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRICKLE3O43900 AC129492.6-201ENST00000611383 1305 ntBASIC16.4■□□□□ 0.22
PRICKLE3O43900 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRICKLE3O43900 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRICKLE3O43900 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
PRICKLE3O43900 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRICKLE3O43900 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRICKLE3O43900 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.39■□□□□ 0.21
PRICKLE3O43900 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRICKLE3O43900 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRICKLE3O43900 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRICKLE3O43900 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PRICKLE3O43900 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PRICKLE3O43900 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.39■□□□□ 0.21
PRICKLE3O43900 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.39■□□□□ 0.21
PRICKLE3O43900 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms