Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PAX4O43316 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
PAX4O43316 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
PAX4O43316 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
PAX4O43316 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
PAX4O43316 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.29□□□□□ -0.44
PAX4O43316 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.29□□□□□ -0.44
PAX4O43316 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
PAX4O43316 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
PAX4O43316 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
PAX4O43316 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.29□□□□□ -0.44
PAX4O43316 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 AC003669.1-201ENST00000334569 611 ntBASIC12.29□□□□□ -0.44
PAX4O43316 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.29□□□□□ -0.44
PAX4O43316 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
PAX4O43316 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.29□□□□□ -0.44
PAX4O43316 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.29□□□□□ -0.44
PAX4O43316 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC12.29□□□□□ -0.44
PAX4O43316 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.29□□□□□ -0.44
PAX4O43316 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.29□□□□□ -0.44
PAX4O43316 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.29□□□□□ -0.44
PAX4O43316 AC073592.5-201ENST00000624854 528 ntBASIC12.29□□□□□ -0.44
PAX4O43316 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
PAX4O43316 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
PAX4O43316 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.29□□□□□ -0.44
PAX4O43316 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.29□□□□□ -0.44
PAX4O43316 AL049757.1-201ENST00000616842 1596 ntBASIC12.29□□□□□ -0.44
PAX4O43316 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
PAX4O43316 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.29□□□□□ -0.44
PAX4O43316 LYSMD4-203ENST00000378904 2122 ntBASIC12.29□□□□□ -0.44
PAX4O43316 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.29□□□□□ -0.44
PAX4O43316 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
PAX4O43316 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
PAX4O43316 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
PAX4O43316 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.29□□□□□ -0.44
PAX4O43316 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
PAX4O43316 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PAX4O43316 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.28□□□□□ -0.44
PAX4O43316 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.28□□□□□ -0.44
PAX4O43316 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
PAX4O43316 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
PAX4O43316 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.28□□□□□ -0.44
PAX4O43316 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
PAX4O43316 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.28□□□□□ -0.44
PAX4O43316 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC12.28□□□□□ -0.44
PAX4O43316 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
PAX4O43316 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.28□□□□□ -0.44
PAX4O43316 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
PAX4O43316 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.28□□□□□ -0.44
PAX4O43316 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.28□□□□□ -0.44
PAX4O43316 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.28□□□□□ -0.44
PAX4O43316 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.28□□□□□ -0.44
PAX4O43316 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.28□□□□□ -0.44
PAX4O43316 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 BNIP3P41-202ENST00000616656 861 ntBASIC12.28□□□□□ -0.44
PAX4O43316 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
PAX4O43316 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.28□□□□□ -0.44
PAX4O43316 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.28□□□□□ -0.44
PAX4O43316 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PAX4O43316 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms