Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SIGLEC30P-201ENST00000455569 941 ntBASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 LINC00554-201ENST00000564841 3011 ntBASIC16.88■□□□□ 0.29
TMX2-CTNND1H3BSU7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 NCF1C-201ENST00000438382 1427 ntBASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 AC003669.1-201ENST00000334569 611 ntBASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 AC211486.1-202ENST00000416371 468 ntBASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 MCCD1P2-201ENST00000423228 335 ntBASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 PMS2P2-201ENST00000425039 1128 ntBASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 RPS8P6-201ENST00000426177 609 ntBASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 AC211476.1-201ENST00000503899 468 ntBASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 AC004706.3-202ENST00000621574 984 ntBASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 AC134684.3-201ENST00000641758 218 ntBASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMX2-CTNND1H3BSU7 AL353593.2-201ENST00000602529 1483 ntBASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 HTR7P1-202ENST00000624664 4411 ntBASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 SLC25A6P5-201ENST00000435663 894 ntBASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 AC002310.6-201ENST00000624451 1377 ntBASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 AC093677.2-201ENST00000600169 1863 ntBASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.86■□□□□ 0.29
TMX2-CTNND1H3BSU7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMX2-CTNND1H3BSU7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms