Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP99D6REC4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP99D6REC4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP99D6REC4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP99D6REC4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.14■□□□□ 0.33
CFAP99D6REC4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP99D6REC4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP99D6REC4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP99D6REC4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP99D6REC4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP99D6REC4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP99D6REC4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP99D6REC4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP99D6REC4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 AF186996.4-201ENST00000467186 377 ntBASIC17.13■□□□□ 0.33
CFAP99D6REC4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP99D6REC4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 MTDHP4-201ENST00000600287 670 ntBASIC17.13■□□□□ 0.33
CFAP99D6REC4 AC064862.7-201ENST00000604520 867 ntBASIC17.13■□□□□ 0.33
CFAP99D6REC4 AL589182.2-201ENST00000619332 1049 ntBASIC17.13■□□□□ 0.33
CFAP99D6REC4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP99D6REC4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP99D6REC4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP99D6REC4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP99D6REC4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP99D6REC4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP99D6REC4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.13■□□□□ 0.33
CFAP99D6REC4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP99D6REC4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFAP99D6REC4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
CFAP99D6REC4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 AC004817.3-201ENST00000602957 2129 ntBASIC17.12■□□□□ 0.33
CFAP99D6REC4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CFAP99D6REC4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CFAP99D6REC4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CFAP99D6REC4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.12■□□□□ 0.33
CFAP99D6REC4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CFAP99D6REC4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.12■□□□□ 0.33
CFAP99D6REC4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.12■□□□□ 0.33
CFAP99D6REC4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.12■□□□□ 0.33
CFAP99D6REC4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.12■□□□□ 0.33
CFAP99D6REC4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.12■□□□□ 0.33
CFAP99D6REC4 AC139887.3-201ENST00000568585 713 ntBASIC17.12■□□□□ 0.33
CFAP99D6REC4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.12■□□□□ 0.33
CFAP99D6REC4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.12■□□□□ 0.33
CFAP99D6REC4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CFAP99D6REC4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.12■□□□□ 0.33
CFAP99D6REC4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CFAP99D6REC4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 PP12613-201ENST00000424958 2230 ntBASIC17.12■□□□□ 0.33
CFAP99D6REC4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFAP99D6REC4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.12■□□□□ 0.33
CFAP99D6REC4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP99D6REC4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CFAP99D6REC4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.11■□□□□ 0.33
CFAP99D6REC4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP99D6REC4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP99D6REC4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP99D6REC4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP99D6REC4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP99D6REC4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFAP99D6REC4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms