Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 PCDH8P1-201ENST00000428983 2773 ntBASIC13.97□□□□□ -0.17
LINC00473A8K010 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LINC00473A8K010 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LINC00473A8K010 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
LINC00473A8K010 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00473A8K010 IER3-202ENST00000376377 1350 ntBASIC13.96□□□□□ -0.17
LINC00473A8K010 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00473A8K010 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00473A8K010 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00473A8K010 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00473A8K010 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00473A8K010 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00473A8K010 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00473A8K010 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00473A8K010 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00473A8K010 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LINC00473A8K010 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00473A8K010 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00473A8K010 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00473A8K010 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LINC00473A8K010 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
LINC00473A8K010 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.96□□□□□ -0.17
LINC00473A8K010 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00473A8K010 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00473A8K010 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00473A8K010 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00473A8K010 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00473A8K010 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.96□□□□□ -0.17
LINC00473A8K010 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00473A8K010 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.96□□□□□ -0.17
LINC00473A8K010 AC074051.2-201ENST00000565115 352 ntBASIC13.96□□□□□ -0.17
LINC00473A8K010 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00473A8K010 AC087388.1-201ENST00000571370 1112 ntBASIC13.96□□□□□ -0.17
LINC00473A8K010 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00473A8K010 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00473A8K010 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.96□□□□□ -0.17
LINC00473A8K010 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LINC00473A8K010 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00473A8K010 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00473A8K010 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00473A8K010 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00473A8K010 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
LINC00473A8K010 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00473A8K010 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00473A8K010 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.96□□□□□ -0.18
LINC00473A8K010 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00473A8K010 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.96□□□□□ -0.18
LINC00473A8K010 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
LINC00473A8K010 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.96□□□□□ -0.18
LINC00473A8K010 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LINC00473A8K010 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LINC00473A8K010 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00473A8K010 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00473A8K010 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LINC00473A8K010 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LINC00473A8K010 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00473A8K010 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
LINC00473A8K010 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 AL020989.1-201ENST00000422979 469 ntBASIC13.95□□□□□ -0.18
LINC00473A8K010 NUS1P1-201ENST00000446295 882 ntBASIC13.95□□□□□ -0.18
LINC00473A8K010 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC00473A8K010 MIR3180-1-201ENST00000580374 94 ntBASIC13.95□□□□□ -0.18
LINC00473A8K010 MIR3180-3-201ENST00000584616 94 ntBASIC13.95□□□□□ -0.18
LINC00473A8K010 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.95□□□□□ -0.18
LINC00473A8K010 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00473A8K010 AC114341.1-201ENST00000618070 349 ntBASIC13.95□□□□□ -0.18
LINC00473A8K010 AP000867.4-201ENST00000641616 219 ntBASIC13.95□□□□□ -0.18
LINC00473A8K010 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LINC00473A8K010 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00473A8K010 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LINC00473A8K010 DOC2GP-204ENST00000639052 2548 ntBASIC13.95□□□□□ -0.18
LINC00473A8K010 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00473A8K010 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LINC00473A8K010 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LINC00473A8K010 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
LINC00473A8K010 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LINC00473A8K010 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LINC00473A8K010 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms