Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.57■■□□□ 1.04
LOC102724428A0A0B4J2F2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 HLA-V-204ENST00000476601 1289 ntBASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.56■■□□□ 1.04
LOC102724428A0A0B4J2F2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LOC102724428A0A0B4J2F2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 AC133963.1-201ENST00000504166 1679 ntBASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 AC009477.1-201ENST00000452936 217 ntBASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 LINC00895-201ENST00000629028 1637 ntBASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.54■■□□□ 1.04
LOC102724428A0A0B4J2F2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms