Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PTCH2Q9Y6C5 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.18■□□□□ 0.66
PTCH2Q9Y6C5 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PTCH2Q9Y6C5 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.18■□□□□ 0.66
PTCH2Q9Y6C5 AC007967.4-201ENST00000614700 386 ntBASIC19.18■□□□□ 0.66
PTCH2Q9Y6C5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCH2Q9Y6C5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCH2Q9Y6C5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.18■□□□□ 0.66
PTCH2Q9Y6C5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCH2Q9Y6C5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.18■□□□□ 0.66
PTCH2Q9Y6C5 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCH2Q9Y6C5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.18■□□□□ 0.66
PTCH2Q9Y6C5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTCH2Q9Y6C5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PTCH2Q9Y6C5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
PTCH2Q9Y6C5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTCH2Q9Y6C5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 AP006294.1-201ENST00000415407 339 ntBASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 AC090164.3-201ENST00000610780 2143 ntBASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 AL020996.1-203ENST00000536896 2307 ntBASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTCH2Q9Y6C5 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 SLC25A6P5-201ENST00000435663 894 ntBASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 KRT17P8-201ENST00000540749 863 ntBASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 AC104794.3-201ENST00000566840 1248 ntBASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 AC016027.1-202ENST00000607927 1699 ntBASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTCH2Q9Y6C5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 RAB43P1-201ENST00000561790 589 ntBASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 AL031055.1-201ENST00000606362 631 ntBASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTCH2Q9Y6C5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms