Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TSSC4Q9Y5U2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.48□□□□□ -0.25
TSSC4Q9Y5U2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TSSC4Q9Y5U2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.48□□□□□ -0.25
TSSC4Q9Y5U2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.48□□□□□ -0.25
TSSC4Q9Y5U2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TSSC4Q9Y5U2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TSSC4Q9Y5U2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.48□□□□□ -0.25
TSSC4Q9Y5U2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.48□□□□□ -0.25
TSSC4Q9Y5U2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
TSSC4Q9Y5U2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 GPX1P2-201ENST00000429271 606 ntBASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 VN2R19P-201ENST00000442399 1052 ntBASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 AL691403.2-201ENST00000618460 490 ntBASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 AC018695.7-201ENST00000624587 2492 ntBASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TSSC4Q9Y5U2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 AC002310.6-201ENST00000624451 1377 ntBASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 AC138028.4-201ENST00000564984 1845 ntBASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 CICP6-201ENST00000457191 2729 ntBASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 AP002414.1-201ENST00000391405 1147 ntBASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 MRPL20P1-201ENST00000400819 433 ntBASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 RPSAP43-201ENST00000402237 625 ntBASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 AC023274.1-201ENST00000418278 595 ntBASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 LINC00982-205ENST00000420957 435 ntBASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TSSC4Q9Y5U2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms