Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM17Q9Y577 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM17Q9Y577 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM17Q9Y577 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM17Q9Y577 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM17Q9Y577 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM17Q9Y577 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM17Q9Y577 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRIM17Q9Y577 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM17Q9Y577 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM17Q9Y577 RNU1-129P-201ENST00000384064 167 ntBASIC19.21■□□□□ 0.67
TRIM17Q9Y577 AC142381.1-201ENST00000426099 345 ntBASIC19.21■□□□□ 0.67
TRIM17Q9Y577 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM17Q9Y577 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.21■□□□□ 0.67
TRIM17Q9Y577 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM17Q9Y577 AC135586.1-201ENST00000539323 574 ntBASIC19.21■□□□□ 0.67
TRIM17Q9Y577 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM17Q9Y577 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM17Q9Y577 U1.21-201ENST00000580816 167 ntBASIC19.21■□□□□ 0.67
TRIM17Q9Y577 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.21■□□□□ 0.67
TRIM17Q9Y577 SPTSSB-204ENST00000617024 1292 ntBASIC19.21■□□□□ 0.67
TRIM17Q9Y577 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.21■□□□□ 0.67
TRIM17Q9Y577 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM17Q9Y577 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.2■□□□□ 0.66
TRIM17Q9Y577 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 AL391825.1-201ENST00000457671 1364 ntBASIC19.2■□□□□ 0.66
TRIM17Q9Y577 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRIM17Q9Y577 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 CHCHD2P3-201ENST00000603038 451 ntBASIC19.19■□□□□ 0.66
TRIM17Q9Y577 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 AL353732.1-201ENST00000569618 1459 ntBASIC19.19■□□□□ 0.66
TRIM17Q9Y577 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRIM17Q9Y577 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM17Q9Y577 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM17Q9Y577 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM17Q9Y577 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRIM17Q9Y577 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms