Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AL135744.1-201ENST00000565098 629 ntBASIC17.81■□□□□ 0.44
YIPF1Q9Y548 RARRES2P8-201ENST00000566335 367 ntBASIC17.81■□□□□ 0.44
YIPF1Q9Y548 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.81■□□□□ 0.44
YIPF1Q9Y548 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.81■□□□□ 0.44
YIPF1Q9Y548 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
YIPF1Q9Y548 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
YIPF1Q9Y548 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YIPF1Q9Y548 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YIPF1Q9Y548 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.81■□□□□ 0.44
YIPF1Q9Y548 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
YIPF1Q9Y548 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.81■□□□□ 0.44
YIPF1Q9Y548 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YIPF1Q9Y548 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
YIPF1Q9Y548 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
YIPF1Q9Y548 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 AC116353.5-201ENST00000638148 1699 ntBASIC17.8■□□□□ 0.44
YIPF1Q9Y548 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 TFAMP1-201ENST00000412727 736 ntBASIC17.8■□□□□ 0.44
YIPF1Q9Y548 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 HLA-J-203ENST00000494367 1087 ntBASIC17.8■□□□□ 0.44
YIPF1Q9Y548 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 AC109322.1-201ENST00000524499 1264 ntBASIC17.8■□□□□ 0.44
YIPF1Q9Y548 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 AL009183.1-201ENST00000603760 355 ntBASIC17.8■□□□□ 0.44
YIPF1Q9Y548 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
YIPF1Q9Y548 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 TOP3BP1-201ENST00000420768 1380 ntBASIC17.79■□□□□ 0.44
YIPF1Q9Y548 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 HCG4-201ENST00000418983 998 ntBASIC17.79■□□□□ 0.44
YIPF1Q9Y548 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 AC079140.1-201ENST00000508039 487 ntBASIC17.79■□□□□ 0.44
YIPF1Q9Y548 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 AC091167.2-201ENST00000579581 588 ntBASIC17.79■□□□□ 0.44
YIPF1Q9Y548 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 AC009093.7-201ENST00000623853 1223 ntBASIC17.79■□□□□ 0.44
YIPF1Q9Y548 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 LINC00628-201ENST00000628516 1289 ntBASIC17.79■□□□□ 0.44
YIPF1Q9Y548 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 SLC22A20-204ENST00000530038 1673 ntBASIC17.79■□□□□ 0.44
YIPF1Q9Y548 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
YIPF1Q9Y548 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
YIPF1Q9Y548 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms