Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 AC003669.1-201ENST00000334569 611 ntBASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 RPSAP43-201ENST00000402237 625 ntBASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 RPS8P6-201ENST00000426177 609 ntBASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 GPX1P2-201ENST00000429271 606 ntBASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 AC112482.1-201ENST00000492080 688 ntBASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 AC002347.1-201ENST00000569543 541 ntBASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 AC004706.3-202ENST00000621574 984 ntBASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.85■□□□□ 0.13
NPIPA1Q9UND3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 AC006504.4-201ENST00000592118 1568 ntBASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 AL138688.1-201ENST00000624851 1594 ntBASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 ELK2BP-201ENST00000415014 1224 ntBASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 IGHV3-52-201ENST00000519770 353 ntBASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 NCF1C-201ENST00000438382 1427 ntBASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NPIPA1Q9UND3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPA1Q9UND3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPA1Q9UND3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPA1Q9UND3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.83■□□□□ 0.13
NPIPA1Q9UND3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms