Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 AC023141.5-201ENST00000458585 616 ntBASIC17.21■□□□□ 0.35
MBD1Q9UIS9 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD1Q9UIS9 AL645608.8-201ENST00000606034 2086 ntBASIC17.2■□□□□ 0.34
MBD1Q9UIS9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 AC046185.3-201ENST00000623228 1824 ntBASIC17.2■□□□□ 0.34
MBD1Q9UIS9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 ADH5P3-201ENST00000433842 1137 ntBASIC17.2■□□□□ 0.34
MBD1Q9UIS9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 PAWRP1-201ENST00000451083 565 ntBASIC17.2■□□□□ 0.34
MBD1Q9UIS9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 AC025678.2-201ENST00000562061 970 ntBASIC17.2■□□□□ 0.34
MBD1Q9UIS9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.2■□□□□ 0.34
MBD1Q9UIS9 AC005498.2-205ENST00000593218 784 ntBASIC17.2■□□□□ 0.34
MBD1Q9UIS9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 LINC00628-201ENST00000628516 1289 ntBASIC17.2■□□□□ 0.34
MBD1Q9UIS9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.2■□□□□ 0.34
MBD1Q9UIS9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 AL138688.1-201ENST00000624851 1594 ntBASIC17.19■□□□□ 0.34
MBD1Q9UIS9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.19■□□□□ 0.34
MBD1Q9UIS9 SLC25A6P2-201ENST00000497974 877 ntBASIC17.19■□□□□ 0.34
MBD1Q9UIS9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 AC093520.2-201ENST00000561830 333 ntBASIC17.19■□□□□ 0.34
MBD1Q9UIS9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.19■□□□□ 0.34
MBD1Q9UIS9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
MBD1Q9UIS9 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MBD1Q9UIS9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms