Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 KRT18P48-201ENST00000434763 852 ntBASIC15.16■□□□□ 0.02
DUX4Q9UBX2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 AL136038.3-201ENST00000561909 1096 ntBASIC15.16■□□□□ 0.02
DUX4Q9UBX2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.16■□□□□ 0.02
DUX4Q9UBX2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 PCDHA1-201ENST00000378133 2726 ntBASIC15.15■□□□□ 0.02
DUX4Q9UBX2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 PCED1CP-201ENST00000419887 785 ntBASIC15.15■□□□□ 0.02
DUX4Q9UBX2 AP003733.1-201ENST00000491725 852 ntBASIC15.15■□□□□ 0.02
DUX4Q9UBX2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.15■□□□□ 0.02
DUX4Q9UBX2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 AC132938.6-201ENST00000623828 1655 ntBASIC15.14■□□□□ 0.01
DUX4Q9UBX2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 AC005332.3-201ENST00000589904 676 ntBASIC15.14■□□□□ 0.01
DUX4Q9UBX2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 AC004263.2-201ENST00000617183 678 ntBASIC15.14■□□□□ 0.01
DUX4Q9UBX2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.14■□□□□ 0.01
DUX4Q9UBX2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX4Q9UBX2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms