Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 AC087499.5-201ENST00000452760 1342 ntBASIC17.94■□□□□ 0.46
CHD7Q9P2D1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 ZNF890P-202ENST00000530367 1156 ntBASIC17.94■□□□□ 0.46
CHD7Q9P2D1 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHD7Q9P2D1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 AC105233.2-201ENST00000523697 349 ntBASIC17.93■□□□□ 0.46
CHD7Q9P2D1 AF228730.5-201ENST00000530288 346 ntBASIC17.93■□□□□ 0.46
CHD7Q9P2D1 WASH4P-201ENST00000564273 1246 ntBASIC17.93■□□□□ 0.46
CHD7Q9P2D1 RARRES2P9-201ENST00000565168 469 ntBASIC17.93■□□□□ 0.46
CHD7Q9P2D1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 BTBD7P1-201ENST00000447253 1453 ntBASIC17.93■□□□□ 0.46
CHD7Q9P2D1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.93■□□□□ 0.46
CHD7Q9P2D1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 MIR4259-201ENST00000584466 101 ntBASIC17.93■□□□□ 0.46
CHD7Q9P2D1 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.93■□□□□ 0.46
CHD7Q9P2D1 AC098818.2-201ENST00000564925 2320 ntBASIC17.93■□□□□ 0.46
CHD7Q9P2D1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 REXO1L6P-201ENST00000603433 1515 ntBASIC17.92■□□□□ 0.46
CHD7Q9P2D1 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.92■□□□□ 0.46
CHD7Q9P2D1 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 RNU1-129P-201ENST00000384064 167 ntBASIC17.91■□□□□ 0.46
CHD7Q9P2D1 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms