Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 STK19B-204ENST00000512515 211 ntBASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 AL353801.3-201ENST00000609898 542 ntBASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 FRMD8P1-201ENST00000440433 1524 ntBASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC42SE2Q9NRR3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
CDC42SE2Q9NRR3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
CDC42SE2Q9NRR3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
CDC42SE2Q9NRR3 AL353593.2-201ENST00000602529 1483 ntBASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 CYP2T1P-202ENST00000641596 2535 ntBASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 RN7SL606P-201ENST00000472779 293 ntBASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 AC011840.4-201ENST00000578471 627 ntBASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 AC124864.1-201ENST00000623408 392 ntBASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 AC133561.5-201ENST00000635547 218 ntBASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 AC009336.1-201ENST00000608941 1553 ntBASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE2Q9NRR3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 AC079328.2-201ENST00000561241 3354 ntBASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 AC026691.1-201ENST00000602502 2017 ntBASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CDC42SE2Q9NRR3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms