Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 RBM17P3-201ENST00000417687 1192 ntBASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 AC004817.3-201ENST00000602957 2129 ntBASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 AL121772.3-201ENST00000610840 674 ntBASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRRC40Q9H9A6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC40Q9H9A6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 LINC00982-205ENST00000420957 435 ntBASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 PRYP5-201ENST00000451909 266 ntBASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 AL732292.2-201ENST00000609649 430 ntBASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRC40Q9H9A6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRC40Q9H9A6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms