Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF41Q9H4P4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF41Q9H4P4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF41Q9H4P4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RNF41Q9H4P4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF41Q9H4P4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 FZD10-202ENST00000539839 3282 ntBASIC20.19■□□□□ 0.82
RNF41Q9H4P4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 CRYGEP-201ENST00000412192 528 ntBASIC20.19■□□□□ 0.82
RNF41Q9H4P4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 VN2R19P-201ENST00000442399 1052 ntBASIC20.19■□□□□ 0.82
RNF41Q9H4P4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF41Q9H4P4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 SLC25A6P2-201ENST00000497974 877 ntBASIC20.18■□□□□ 0.82
RNF41Q9H4P4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 AC002310.6-201ENST00000624451 1377 ntBASIC20.18■□□□□ 0.82
RNF41Q9H4P4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF41Q9H4P4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 OR7E47P-204ENST00000575924 449 ntBASIC20.17■□□□□ 0.82
RNF41Q9H4P4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 AC129492.6-201ENST00000611383 1305 ntBASIC20.17■□□□□ 0.82
RNF41Q9H4P4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 AC092053.1-201ENST00000605787 1936 ntBASIC20.17■□□□□ 0.82
RNF41Q9H4P4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RNF41Q9H4P4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms