Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
TUBB1Q9H4B7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 IGHV3-47-201ENST00000425060 335 ntBASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 AP000867.4-201ENST00000641616 219 ntBASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 NSUN5P1-202ENST00000421140 1535 ntBASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 NSUN5P2-203ENST00000457352 1529 ntBASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 AC026691.1-201ENST00000602502 2017 ntBASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.53■□□□□ 0.24
TUBB1Q9H4B7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 AL391256.1-201ENST00000443260 1855 ntBASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 KRT17P6-201ENST00000453795 1220 ntBASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 TOB2P1-201ENST00000469761 992 ntBASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 AC096582.2-201ENST00000510860 516 ntBASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBB1Q9H4B7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBB1Q9H4B7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TUBB1Q9H4B7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBB1Q9H4B7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.52■□□□□ 0.23
TUBB1Q9H4B7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.52■□□□□ 0.23
TUBB1Q9H4B7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.52■□□□□ 0.23
TUBB1Q9H4B7 AC004817.3-201ENST00000602957 2129 ntBASIC16.52■□□□□ 0.23
TUBB1Q9H4B7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TUBB1Q9H4B7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBB1Q9H4B7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.52■□□□□ 0.23
TUBB1Q9H4B7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TUBB1Q9H4B7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBB1Q9H4B7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBB1Q9H4B7 AC092364.2-201ENST00000596710 2692 ntBASIC16.52■□□□□ 0.23
TUBB1Q9H4B7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.23
TUBB1Q9H4B7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBB1Q9H4B7 AL391005.1-201ENST00000623953 2435 ntBASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms