Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HIPK3Q9H422 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HIPK3Q9H422 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.64■□□□□ 0.57
HIPK3Q9H422 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIPK3Q9H422 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HIPK3Q9H422 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.64■□□□□ 0.57
HIPK3Q9H422 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.64■□□□□ 0.57
HIPK3Q9H422 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HIPK3Q9H422 WASH6P-202ENST00000359512 1437 ntBASIC18.64■□□□□ 0.57
HIPK3Q9H422 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.64■□□□□ 0.57
HIPK3Q9H422 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HIPK3Q9H422 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HIPK3Q9H422 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HIPK3Q9H422 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIPK3Q9H422 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIPK3Q9H422 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.63■□□□□ 0.57
HIPK3Q9H422 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.63■□□□□ 0.57
HIPK3Q9H422 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIPK3Q9H422 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIPK3Q9H422 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HIPK3Q9H422 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.63■□□□□ 0.57
HIPK3Q9H422 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIPK3Q9H422 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HIPK3Q9H422 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.63■□□□□ 0.57
HIPK3Q9H422 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.63■□□□□ 0.57
HIPK3Q9H422 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.63■□□□□ 0.57
HIPK3Q9H422 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.63■□□□□ 0.57
HIPK3Q9H422 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.63■□□□□ 0.57
HIPK3Q9H422 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HIPK3Q9H422 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HIPK3Q9H422 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIPK3Q9H422 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.63■□□□□ 0.57
HIPK3Q9H422 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIPK3Q9H422 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
HIPK3Q9H422 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIPK3Q9H422 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIPK3Q9H422 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIPK3Q9H422 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIPK3Q9H422 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HIPK3Q9H422 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HIPK3Q9H422 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIPK3Q9H422 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIPK3Q9H422 AC007613.1-201ENST00000572811 2597 ntBASIC18.62■□□□□ 0.57
HIPK3Q9H422 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIPK3Q9H422 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HIPK3Q9H422 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 AC092580.3-201ENST00000430932 139 ntBASIC18.62■□□□□ 0.57
HIPK3Q9H422 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 SERBP1P5-201ENST00000510079 1181 ntBASIC18.62■□□□□ 0.57
HIPK3Q9H422 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 AC008267.7-201ENST00000624570 1194 ntBASIC18.62■□□□□ 0.57
HIPK3Q9H422 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIPK3Q9H422 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIPK3Q9H422 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HIPK3Q9H422 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.61■□□□□ 0.57
HIPK3Q9H422 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.61■□□□□ 0.57
HIPK3Q9H422 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIPK3Q9H422 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.61■□□□□ 0.57
HIPK3Q9H422 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIPK3Q9H422 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HIPK3Q9H422 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIPK3Q9H422 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HIPK3Q9H422 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIPK3Q9H422 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.61■□□□□ 0.57
HIPK3Q9H422 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIPK3Q9H422 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
HIPK3Q9H422 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.61■□□□□ 0.57
HIPK3Q9H422 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.61■□□□□ 0.57
HIPK3Q9H422 AC241585.1-201ENST00000433527 519 ntBASIC18.61■□□□□ 0.57
HIPK3Q9H422 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.61■□□□□ 0.57
HIPK3Q9H422 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HIPK3Q9H422 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.61■□□□□ 0.57
HIPK3Q9H422 AP000842.3-202ENST00000569238 1080 ntBASIC18.61■□□□□ 0.57
HIPK3Q9H422 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.61■□□□□ 0.57
HIPK3Q9H422 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.61■□□□□ 0.57
HIPK3Q9H422 LINC01451-201ENST00000623792 534 ntBASIC18.61■□□□□ 0.57
HIPK3Q9H422 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
HIPK3Q9H422 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIPK3Q9H422 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIPK3Q9H422 AC005332.8-201ENST00000622750 2735 ntBASIC18.61■□□□□ 0.57
HIPK3Q9H422 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIPK3Q9H422 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIPK3Q9H422 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIPK3Q9H422 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIPK3Q9H422 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms