Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 AC010203.1-204ENST00000548782 407 ntBASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 AC073912.3-201ENST00000624414 853 ntBASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 AC126755.1-201ENST00000525846 6405 ntBASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
COMMD4Q9H0A8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 AC113347.1-201ENST00000413321 391 ntBASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 AC092597.1-201ENST00000487352 616 ntBASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
COMMD4Q9H0A8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 AC078925.2-201ENST00000624013 1973 ntBASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 AC092068.3-201ENST00000587894 2016 ntBASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 AC005332.3-201ENST00000589904 676 ntBASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 AC019129.2-201ENST00000609837 1235 ntBASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 AC133561.5-201ENST00000635547 218 ntBASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 EGFEM1P-202ENST00000431685 1563 ntBASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
COMMD4Q9H0A8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms