Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM2Q9C040 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRIM2Q9C040 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM2Q9C040 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM2Q9C040 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
TRIM2Q9C040 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM2Q9C040 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM2Q9C040 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM2Q9C040 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM2Q9C040 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM2Q9C040 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
TRIM2Q9C040 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 RCN1P2-201ENST00000398357 915 ntBASIC15.82■□□□□ 0.12
TRIM2Q9C040 NUS1P1-201ENST00000446295 882 ntBASIC15.82■□□□□ 0.12
TRIM2Q9C040 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM2Q9C040 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.82■□□□□ 0.12
TRIM2Q9C040 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM2Q9C040 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM2Q9C040 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM2Q9C040 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM2Q9C040 AC114341.1-201ENST00000618070 349 ntBASIC15.82■□□□□ 0.12
TRIM2Q9C040 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM2Q9C040 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRIM2Q9C040 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TRIM2Q9C040 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM2Q9C040 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
TRIM2Q9C040 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
TRIM2Q9C040 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM2Q9C040 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM2Q9C040 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM2Q9C040 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TRIM2Q9C040 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM2Q9C040 PMPCAP1-201ENST00000508114 1576 ntBASIC15.81■□□□□ 0.12
TRIM2Q9C040 AP000867.3-201ENST00000524675 377 ntBASIC15.81■□□□□ 0.12
TRIM2Q9C040 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM2Q9C040 AC012615.1-201ENST00000565797 1299 ntBASIC15.81■□□□□ 0.12
TRIM2Q9C040 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM2Q9C040 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.81■□□□□ 0.12
TRIM2Q9C040 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM2Q9C040 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM2Q9C040 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM2Q9C040 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM2Q9C040 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM2Q9C040 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRIM2Q9C040 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM2Q9C040 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRIM2Q9C040 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM2Q9C040 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM2Q9C040 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM2Q9C040 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRIM2Q9C040 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TRIM2Q9C040 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM2Q9C040 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM2Q9C040 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM2Q9C040 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms