Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12□□□□□ -0.49
UPK3BQ9BT76 AC006557.2-201ENST00000592985 1240 ntBASIC12□□□□□ -0.49
UPK3BQ9BT76 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
UPK3BQ9BT76 AL589182.2-201ENST00000619332 1049 ntBASIC12□□□□□ -0.49
UPK3BQ9BT76 AC008735.5-201ENST00000623544 497 ntBASIC12□□□□□ -0.49
UPK3BQ9BT76 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
UPK3BQ9BT76 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK3BQ9BT76 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12□□□□□ -0.49
UPK3BQ9BT76 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK3BQ9BT76 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC12□□□□□ -0.49
UPK3BQ9BT76 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12□□□□□ -0.49
UPK3BQ9BT76 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK3BQ9BT76 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC12□□□□□ -0.49
UPK3BQ9BT76 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12□□□□□ -0.49
UPK3BQ9BT76 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC12□□□□□ -0.49
UPK3BQ9BT76 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
UPK3BQ9BT76 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC12□□□□□ -0.49
UPK3BQ9BT76 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
UPK3BQ9BT76 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK3BQ9BT76 AC132938.5-201ENST00000624980 1813 ntBASIC12□□□□□ -0.49
UPK3BQ9BT76 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
UPK3BQ9BT76 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 FLJ16779-201ENST00000612722 7638 ntBASIC11.99□□□□□ -0.49
UPK3BQ9BT76 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 RPS2P1-201ENST00000434010 821 ntBASIC11.99□□□□□ -0.49
UPK3BQ9BT76 HNRNPDP1-201ENST00000439535 754 ntBASIC11.99□□□□□ -0.49
UPK3BQ9BT76 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 LITAF-211ENST00000572255 516 ntTSL 4 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 AC120114.3-201ENST00000611923 658 ntBASIC11.99□□□□□ -0.49
UPK3BQ9BT76 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 PGM5P2-202ENST00000637225 1043 ntBASIC11.99□□□□□ -0.49
UPK3BQ9BT76 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
UPK3BQ9BT76 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 IL9RP2-201ENST00000423948 1312 ntBASIC11.98□□□□□ -0.49
UPK3BQ9BT76 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 BX005266.1-201ENST00000473402 457 ntBASIC11.98□□□□□ -0.49
UPK3BQ9BT76 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 S100A2-206ENST00000497140 697 ntTSL 2 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 STK19B-204ENST00000512515 211 ntBASIC11.98□□□□□ -0.49
UPK3BQ9BT76 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC11.98□□□□□ -0.49
UPK3BQ9BT76 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms