Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 PRELID1P1-202ENST00000567272 903 ntBASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 DOC2GP-204ENST00000639052 2548 ntBASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 HLA-A-202ENST00000376806 1854 ntBASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.78■□□□□ 0.44
HERPUD2Q9BSE4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 AC099336.1-202ENST00000602961 463 ntBASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HERPUD2Q9BSE4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HERPUD2Q9BSE4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HERPUD2Q9BSE4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HERPUD2Q9BSE4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HERPUD2Q9BSE4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
HERPUD2Q9BSE4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
HERPUD2Q9BSE4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
HERPUD2Q9BSE4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HERPUD2Q9BSE4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HERPUD2Q9BSE4 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.77■□□□□ 0.43
HERPUD2Q9BSE4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HERPUD2Q9BSE4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 AL020989.1-201ENST00000422979 469 ntBASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 AL450487.1-201ENST00000426799 995 ntBASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 AC104819.1-201ENST00000504587 486 ntBASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 MIR5100-201ENST00000579544 119 ntBASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 AC073592.4-201ENST00000623827 446 ntBASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 AC006449.5-201ENST00000610658 2098 ntBASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HERPUD2Q9BSE4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HERPUD2Q9BSE4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HERPUD2Q9BSE4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.75■□□□□ 0.43
HERPUD2Q9BSE4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HERPUD2Q9BSE4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.75■□□□□ 0.43
HERPUD2Q9BSE4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
HERPUD2Q9BSE4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HERPUD2Q9BSE4 SIGLEC16-201ENST00000599858 1437 ntBASIC17.75■□□□□ 0.43
HERPUD2Q9BSE4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HERPUD2Q9BSE4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HERPUD2Q9BSE4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HERPUD2Q9BSE4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.75■□□□□ 0.43
HERPUD2Q9BSE4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HERPUD2Q9BSE4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.75■□□□□ 0.43
HERPUD2Q9BSE4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms