Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.44■□□□□ 0.7
PTPN18Q99952 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN18Q99952 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN18Q99952 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN18Q99952 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN18Q99952 AC087499.5-201ENST00000452760 1342 ntBASIC19.44■□□□□ 0.7
PTPN18Q99952 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN18Q99952 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN18Q99952 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PTPN18Q99952 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN18Q99952 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN18Q99952 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.43■□□□□ 0.7
PTPN18Q99952 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPN18Q99952 INE1-201ENST00000456273 945 ntBASIC19.43■□□□□ 0.7
PTPN18Q99952 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PTPN18Q99952 AC105233.2-201ENST00000523697 349 ntBASIC19.43■□□□□ 0.7
PTPN18Q99952 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPN18Q99952 AF228730.5-201ENST00000530288 346 ntBASIC19.43■□□□□ 0.7
PTPN18Q99952 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.43■□□□□ 0.7
PTPN18Q99952 AC140912.1-201ENST00000577171 1054 ntBASIC19.43■□□□□ 0.7
PTPN18Q99952 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.43■□□□□ 0.7
PTPN18Q99952 AC091167.2-201ENST00000579581 588 ntBASIC19.43■□□□□ 0.7
PTPN18Q99952 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
PTPN18Q99952 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN18Q99952 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTPN18Q99952 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PTPN18Q99952 LINC00304-203ENST00000565008 1864 ntBASIC19.43■□□□□ 0.7
PTPN18Q99952 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN18Q99952 TOP3BP1-201ENST00000420768 1380 ntBASIC19.43■□□□□ 0.7
PTPN18Q99952 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPN18Q99952 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN18Q99952 AIRN-201ENST00000601203 4374 ntBASIC19.42■□□□□ 0.7
PTPN18Q99952 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN18Q99952 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN18Q99952 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN18Q99952 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PTPN18Q99952 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN18Q99952 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN18Q99952 RPL37AP1-201ENST00000412502 279 ntBASIC19.42■□□□□ 0.7
PTPN18Q99952 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN18Q99952 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPN18Q99952 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.42■□□□□ 0.7
PTPN18Q99952 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN18Q99952 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN18Q99952 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPN18Q99952 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.42■□□□□ 0.7
PTPN18Q99952 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN18Q99952 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN18Q99952 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN18Q99952 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN18Q99952 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN18Q99952 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN18Q99952 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN18Q99952 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
PTPN18Q99952 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN18Q99952 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN18Q99952 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN18Q99952 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN18Q99952 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN18Q99952 AC098614.1-201ENST00000368528 745 ntBASIC19.41■□□□□ 0.7
PTPN18Q99952 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN18Q99952 RPS2P32-201ENST00000439199 892 ntBASIC19.41■□□□□ 0.7
PTPN18Q99952 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPN18Q99952 GNAQP1-201ENST00000444815 1067 ntBASIC19.41■□□□□ 0.7
PTPN18Q99952 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPN18Q99952 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN18Q99952 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN18Q99952 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN18Q99952 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN18Q99952 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.41■□□□□ 0.7
PTPN18Q99952 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.41■□□□□ 0.7
PTPN18Q99952 AC132938.2-201ENST00000579188 680 ntBASIC19.41■□□□□ 0.7
PTPN18Q99952 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.41■□□□□ 0.7
PTPN18Q99952 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.41■□□□□ 0.7
PTPN18Q99952 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.41■□□□□ 0.7
PTPN18Q99952 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.41■□□□□ 0.7
PTPN18Q99952 AL591163.1-201ENST00000641757 987 ntBASIC19.41■□□□□ 0.7
PTPN18Q99952 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN18Q99952 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PTPN18Q99952 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PTPN18Q99952 AP000974.1-201ENST00000623909 2387 ntBASIC19.41■□□□□ 0.7
PTPN18Q99952 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPN18Q99952 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
PTPN18Q99952 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN18Q99952 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN18Q99952 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN18Q99952 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPN18Q99952 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN18Q99952 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN18Q99952 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN18Q99952 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN18Q99952 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN18Q99952 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.4■□□□□ 0.7
PTPN18Q99952 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.4■□□□□ 0.7
PTPN18Q99952 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN18Q99952 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.4■□□□□ 0.7
PTPN18Q99952 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN18Q99952 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN18Q99952 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN18Q99952 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms