Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CPNE1Q99829 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CPNE1Q99829 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPNE1Q99829 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE1Q99829 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE1Q99829 AC092171.3-201ENST00000610122 2651 ntBASIC17.16■□□□□ 0.34
CPNE1Q99829 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE1Q99829 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE1Q99829 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE1Q99829 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.16■□□□□ 0.34
CPNE1Q99829 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE1Q99829 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE1Q99829 PMPCAP1-201ENST00000508114 1576 ntBASIC17.16■□□□□ 0.34
CPNE1Q99829 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.16■□□□□ 0.34
CPNE1Q99829 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CPNE1Q99829 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.16■□□□□ 0.34
CPNE1Q99829 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE1Q99829 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE1Q99829 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CPNE1Q99829 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.16■□□□□ 0.34
CPNE1Q99829 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE1Q99829 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
CPNE1Q99829 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CPNE1Q99829 DRAXINP1-201ENST00000437611 948 ntBASIC17.16■□□□□ 0.34
CPNE1Q99829 TSSC2-201ENST00000450217 709 ntBASIC17.16■□□□□ 0.34
CPNE1Q99829 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.16■□□□□ 0.34
CPNE1Q99829 FAM86EP-206ENST00000510506 987 ntBASIC17.16■□□□□ 0.34
CPNE1Q99829 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.16■□□□□ 0.34
CPNE1Q99829 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.16■□□□□ 0.34
CPNE1Q99829 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
CPNE1Q99829 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE1Q99829 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE1Q99829 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CPNE1Q99829 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.16■□□□□ 0.34
CPNE1Q99829 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE1Q99829 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CPNE1Q99829 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE1Q99829 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.16■□□□□ 0.34
CPNE1Q99829 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE1Q99829 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPNE1Q99829 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE1Q99829 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE1Q99829 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE1Q99829 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE1Q99829 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE1Q99829 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE1Q99829 PCDHB17P-201ENST00000539533 2393 ntBASIC17.15■□□□□ 0.34
CPNE1Q99829 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE1Q99829 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE1Q99829 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CPNE1Q99829 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE1Q99829 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.15■□□□□ 0.34
CPNE1Q99829 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE1Q99829 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE1Q99829 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.15■□□□□ 0.34
CPNE1Q99829 MINOS1P3-201ENST00000457048 203 ntBASIC17.15■□□□□ 0.34
CPNE1Q99829 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.15■□□□□ 0.34
CPNE1Q99829 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.15■□□□□ 0.34
CPNE1Q99829 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CPNE1Q99829 AC018695.7-201ENST00000624587 2492 ntBASIC17.15■□□□□ 0.34
CPNE1Q99829 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE1Q99829 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CPNE1Q99829 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE1Q99829 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE1Q99829 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE1Q99829 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE1Q99829 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE1Q99829 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.15■□□□□ 0.34
CPNE1Q99829 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE1Q99829 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPNE1Q99829 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CPNE1Q99829 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE1Q99829 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE1Q99829 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE1Q99829 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CPNE1Q99829 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE1Q99829 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE1Q99829 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE1Q99829 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE1Q99829 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CPNE1Q99829 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE1Q99829 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE1Q99829 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE1Q99829 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE1Q99829 ACTG1P4-201ENST00000425123 1122 ntBASIC17.14■□□□□ 0.33
CPNE1Q99829 SIGLEC30P-201ENST00000455569 941 ntBASIC17.14■□□□□ 0.33
CPNE1Q99829 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE1Q99829 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE1Q99829 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE1Q99829 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.14■□□□□ 0.33
CPNE1Q99829 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.14■□□□□ 0.33
CPNE1Q99829 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.14■□□□□ 0.33
CPNE1Q99829 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE1Q99829 AC116407.4-201ENST00000623319 1061 ntBASIC17.14■□□□□ 0.33
CPNE1Q99829 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE1Q99829 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE1Q99829 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE1Q99829 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE1Q99829 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.14■□□□□ 0.33
CPNE1Q99829 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms