Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.18■□□□□ 0.5
RAD9AQ99638 RNU1-129P-201ENST00000384064 167 ntBASIC18.18■□□□□ 0.5
RAD9AQ99638 COX5BP8-201ENST00000416911 349 ntBASIC18.18■□□□□ 0.5
RAD9AQ99638 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.18■□□□□ 0.5
RAD9AQ99638 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAD9AQ99638 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAD9AQ99638 MIR3909-201ENST00000579518 119 ntBASIC18.18■□□□□ 0.5
RAD9AQ99638 U1.21-201ENST00000580816 167 ntBASIC18.18■□□□□ 0.5
RAD9AQ99638 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.18■□□□□ 0.5
RAD9AQ99638 AL031055.1-201ENST00000606362 631 ntBASIC18.18■□□□□ 0.5
RAD9AQ99638 AC004233.3-201ENST00000607794 1269 ntBASIC18.18■□□□□ 0.5
RAD9AQ99638 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.18■□□□□ 0.5
RAD9AQ99638 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RAD9AQ99638 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAD9AQ99638 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RAD9AQ99638 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.18■□□□□ 0.5
RAD9AQ99638 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAD9AQ99638 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAD9AQ99638 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAD9AQ99638 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAD9AQ99638 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAD9AQ99638 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAD9AQ99638 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.17■□□□□ 0.5
RAD9AQ99638 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAD9AQ99638 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAD9AQ99638 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAD9AQ99638 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RAD9AQ99638 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAD9AQ99638 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAD9AQ99638 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAD9AQ99638 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.17■□□□□ 0.5
RAD9AQ99638 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAD9AQ99638 TSSK5P-201ENST00000423978 907 ntBASIC18.17■□□□□ 0.5
RAD9AQ99638 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.17■□□□□ 0.5
RAD9AQ99638 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAD9AQ99638 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAD9AQ99638 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.17■□□□□ 0.5
RAD9AQ99638 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.17■□□□□ 0.5
RAD9AQ99638 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAD9AQ99638 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAD9AQ99638 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RAD9AQ99638 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.17■□□□□ 0.5
RAD9AQ99638 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RAD9AQ99638 AC022144.1-201ENST00000602255 1580 ntBASIC18.17■□□□□ 0.5
RAD9AQ99638 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAD9AQ99638 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAD9AQ99638 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAD9AQ99638 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAD9AQ99638 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAD9AQ99638 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.16■□□□□ 0.5
RAD9AQ99638 HLA-V-201ENST00000429037 534 ntBASIC18.16■□□□□ 0.5
RAD9AQ99638 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.16■□□□□ 0.5
RAD9AQ99638 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.16■□□□□ 0.5
RAD9AQ99638 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.16■□□□□ 0.5
RAD9AQ99638 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAD9AQ99638 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RAD9AQ99638 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.16■□□□□ 0.5
RAD9AQ99638 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.16■□□□□ 0.5
RAD9AQ99638 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAD9AQ99638 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAD9AQ99638 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAD9AQ99638 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAD9AQ99638 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAD9AQ99638 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAD9AQ99638 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.16■□□□□ 0.5
RAD9AQ99638 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAD9AQ99638 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAD9AQ99638 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAD9AQ99638 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAD9AQ99638 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.16■□□□□ 0.5
RAD9AQ99638 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RAD9AQ99638 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAD9AQ99638 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.15■□□□□ 0.5
RAD9AQ99638 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.15■□□□□ 0.5
RAD9AQ99638 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAD9AQ99638 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAD9AQ99638 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.15■□□□□ 0.5
RAD9AQ99638 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAD9AQ99638 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RAD9AQ99638 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAD9AQ99638 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.15■□□□□ 0.5
RAD9AQ99638 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAD9AQ99638 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAD9AQ99638 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAD9AQ99638 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.15■□□□□ 0.5
RAD9AQ99638 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAD9AQ99638 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.15■□□□□ 0.5
RAD9AQ99638 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAD9AQ99638 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.15■□□□□ 0.5
RAD9AQ99638 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.15■□□□□ 0.5
RAD9AQ99638 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.15■□□□□ 0.5
RAD9AQ99638 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RAD9AQ99638 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.15■□□□□ 0.5
RAD9AQ99638 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.15■□□□□ 0.5
RAD9AQ99638 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RAD9AQ99638 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.15■□□□□ 0.5
RAD9AQ99638 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.15■□□□□ 0.5
RAD9AQ99638 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.15■□□□□ 0.5
RAD9AQ99638 AC018529.1-201ENST00000613063 361 ntBASIC18.15■□□□□ 0.5
RAD9AQ99638 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms