Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 AC241585.1-201ENST00000433527 519 ntBASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 AKAP8P1-201ENST00000434743 1349 ntBASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 ACTBP11-201ENST00000436287 1126 ntBASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CSMD1Q96PZ7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CSMD1Q96PZ7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CSMD1Q96PZ7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.46□□□□□ -0.1
CSMD1Q96PZ7 AC012317.2-201ENST00000623305 2251 ntBASIC14.46□□□□□ -0.1
CSMD1Q96PZ7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CSMD1Q96PZ7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CSMD1Q96PZ7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
CSMD1Q96PZ7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.46□□□□□ -0.1
CSMD1Q96PZ7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.1
CSMD1Q96PZ7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.1
CSMD1Q96PZ7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CSMD1Q96PZ7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 RHOQP1-201ENST00000555758 579 ntBASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 MIR6775-201ENST00000617557 69 ntBASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 GNAQP1-201ENST00000444815 1067 ntBASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSMD1Q96PZ7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 AL512343.1-201ENST00000605837 169 ntBASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 COX5BP2-201ENST00000392354 334 ntBASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.44□□□□□ -0.1
CSMD1Q96PZ7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms