Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.15■□□□□ 0.5
CASD1Q96PB1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASD1Q96PB1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASD1Q96PB1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CASD1Q96PB1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CASD1Q96PB1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASD1Q96PB1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CASD1Q96PB1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASD1Q96PB1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CASD1Q96PB1 PMS2P4-201ENST00000412466 1052 ntBASIC18.15■□□□□ 0.5
CASD1Q96PB1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CASD1Q96PB1 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CASD1Q96PB1 SLC25A39P2-201ENST00000537614 270 ntBASIC18.15■□□□□ 0.5
CASD1Q96PB1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.15■□□□□ 0.5
CASD1Q96PB1 AC087641.1-201ENST00000557561 1021 ntBASIC18.15■□□□□ 0.5
CASD1Q96PB1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CASD1Q96PB1 MIR3909-201ENST00000579518 119 ntBASIC18.15■□□□□ 0.5
CASD1Q96PB1 MPDU1-223ENST00000582151 728 ntBASIC18.15■□□□□ 0.5
CASD1Q96PB1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASD1Q96PB1 AC008267.7-201ENST00000624570 1194 ntBASIC18.15■□□□□ 0.5
CASD1Q96PB1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.15■□□□□ 0.5
CASD1Q96PB1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.15■□□□□ 0.5
CASD1Q96PB1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CASD1Q96PB1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.15■□□□□ 0.5
CASD1Q96PB1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASD1Q96PB1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CASD1Q96PB1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASD1Q96PB1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASD1Q96PB1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CASD1Q96PB1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.15■□□□□ 0.5
CASD1Q96PB1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASD1Q96PB1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CASD1Q96PB1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CASD1Q96PB1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.14■□□□□ 0.5
CASD1Q96PB1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CASD1Q96PB1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CASD1Q96PB1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.14■□□□□ 0.49
CASD1Q96PB1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CASD1Q96PB1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CASD1Q96PB1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CASD1Q96PB1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CASD1Q96PB1 AC107890.1-201ENST00000422478 521 ntBASIC18.14■□□□□ 0.49
CASD1Q96PB1 BASP1P1-201ENST00000430708 665 ntBASIC18.14■□□□□ 0.49
CASD1Q96PB1 INGX-202ENST00000489074 768 ntBASIC18.14■□□□□ 0.49
CASD1Q96PB1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.14■□□□□ 0.49
CASD1Q96PB1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.14■□□□□ 0.49
CASD1Q96PB1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CASD1Q96PB1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.14■□□□□ 0.49
CASD1Q96PB1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CASD1Q96PB1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CASD1Q96PB1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.14■□□□□ 0.49
CASD1Q96PB1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CASD1Q96PB1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CASD1Q96PB1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CASD1Q96PB1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.14■□□□□ 0.49
CASD1Q96PB1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CASD1Q96PB1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CASD1Q96PB1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CASD1Q96PB1 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CASD1Q96PB1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.14■□□□□ 0.49
CASD1Q96PB1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CASD1Q96PB1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.13■□□□□ 0.49
CASD1Q96PB1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CASD1Q96PB1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CASD1Q96PB1 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.13■□□□□ 0.49
CASD1Q96PB1 MIR346-201ENST00000362234 95 ntBASIC18.13■□□□□ 0.49
CASD1Q96PB1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.13■□□□□ 0.49
CASD1Q96PB1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.13■□□□□ 0.49
CASD1Q96PB1 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.13■□□□□ 0.49
CASD1Q96PB1 AC125807.1-201ENST00000483097 614 ntBASIC18.13■□□□□ 0.49
CASD1Q96PB1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CASD1Q96PB1 AP000842.3-202ENST00000569238 1080 ntBASIC18.13■□□□□ 0.49
CASD1Q96PB1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.13■□□□□ 0.49
CASD1Q96PB1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.13■□□□□ 0.49
CASD1Q96PB1 AC027307.2-201ENST00000591252 911 ntBASIC18.13■□□□□ 0.49
CASD1Q96PB1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.13■□□□□ 0.49
CASD1Q96PB1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.13■□□□□ 0.49
CASD1Q96PB1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.13■□□□□ 0.49
CASD1Q96PB1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.13■□□□□ 0.49
CASD1Q96PB1 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 FO538757.1-201ENST00000623083 1397 ntBASIC18.13■□□□□ 0.49
CASD1Q96PB1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms