Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 FLJ13224-201ENST00000313737 1514 ntBASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 MIR3909-201ENST00000579518 119 ntBASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 AC027307.2-201ENST00000591252 911 ntBASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 MIR6752-201ENST00000618442 71 ntBASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NECTIN4Q96NY8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NECTIN4Q96NY8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 AC007274.1-201ENST00000439805 662 ntBASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 AL596325.1-201ENST00000563991 1082 ntBASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 AC073592.8-201ENST00000624126 511 ntBASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.64■□□□□ 0.41
NECTIN4Q96NY8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 RN7SL692P-201ENST00000464677 288 ntBASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.63■□□□□ 0.41
NECTIN4Q96NY8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms