Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITCHQ96J02 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ITCHQ96J02 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ITCHQ96J02 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ITCHQ96J02 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ITCHQ96J02 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.38■□□□□ 0.21
ITCHQ96J02 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ITCHQ96J02 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
ITCHQ96J02 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ITCHQ96J02 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
ITCHQ96J02 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.38■□□□□ 0.21
ITCHQ96J02 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
ITCHQ96J02 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
ITCHQ96J02 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ITCHQ96J02 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.38■□□□□ 0.21
ITCHQ96J02 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ITCHQ96J02 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.38■□□□□ 0.21
ITCHQ96J02 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.38■□□□□ 0.21
ITCHQ96J02 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.38■□□□□ 0.21
ITCHQ96J02 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.38■□□□□ 0.21
ITCHQ96J02 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.38■□□□□ 0.21
ITCHQ96J02 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ITCHQ96J02 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.38■□□□□ 0.21
ITCHQ96J02 AC005336.2-201ENST00000593183 939 ntBASIC16.38■□□□□ 0.21
ITCHQ96J02 IGHV3-41-201ENST00000613121 348 ntBASIC16.38■□□□□ 0.21
ITCHQ96J02 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.38■□□□□ 0.21
ITCHQ96J02 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.38■□□□□ 0.21
ITCHQ96J02 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ITCHQ96J02 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ITCHQ96J02 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.38■□□□□ 0.21
ITCHQ96J02 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.38■□□□□ 0.21
ITCHQ96J02 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.38■□□□□ 0.21
ITCHQ96J02 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ITCHQ96J02 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ITCHQ96J02 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ITCHQ96J02 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ITCHQ96J02 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ITCHQ96J02 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
ITCHQ96J02 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ITCHQ96J02 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.38■□□□□ 0.21
ITCHQ96J02 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.38■□□□□ 0.21
ITCHQ96J02 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ITCHQ96J02 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ITCHQ96J02 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ITCHQ96J02 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.37■□□□□ 0.21
ITCHQ96J02 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 AL353593.2-201ENST00000602529 1483 ntBASIC16.37■□□□□ 0.21
ITCHQ96J02 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.37■□□□□ 0.21
ITCHQ96J02 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 AL671277.2-201ENST00000458060 996 ntBASIC16.37■□□□□ 0.21
ITCHQ96J02 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 AC063952.2-201ENST00000498792 1227 ntBASIC16.37■□□□□ 0.21
ITCHQ96J02 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.37■□□□□ 0.21
ITCHQ96J02 STK19B-204ENST00000512515 211 ntBASIC16.37■□□□□ 0.21
ITCHQ96J02 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.37■□□□□ 0.21
ITCHQ96J02 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
ITCHQ96J02 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.37■□□□□ 0.21
ITCHQ96J02 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.37■□□□□ 0.21
ITCHQ96J02 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ITCHQ96J02 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.37■□□□□ 0.21
ITCHQ96J02 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.37■□□□□ 0.21
ITCHQ96J02 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ITCHQ96J02 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
ITCHQ96J02 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 AL135999.2-201ENST00000622438 1686 ntBASIC16.37■□□□□ 0.21
ITCHQ96J02 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.37■□□□□ 0.21
ITCHQ96J02 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ITCHQ96J02 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
ITCHQ96J02 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.36■□□□□ 0.21
ITCHQ96J02 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 AC009336.1-201ENST00000608941 1553 ntBASIC16.36■□□□□ 0.21
ITCHQ96J02 DOC2GP-204ENST00000639052 2548 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms