Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECHDC3Q96DC8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 AC040169.1-201ENST00000565382 521 ntBASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECHDC3Q96DC8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ECHDC3Q96DC8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
ECHDC3Q96DC8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
ECHDC3Q96DC8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.08■□□□□ 0.33
ECHDC3Q96DC8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
ECHDC3Q96DC8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
ECHDC3Q96DC8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ECHDC3Q96DC8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 TOP3BP1-201ENST00000420768 1380 ntBASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 AC018845.2-201ENST00000568326 409 ntBASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms