Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 GNAQP1-201ENST00000444815 1067 ntBASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 AC132938.2-201ENST00000579188 680 ntBASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 TEX28P1-201ENST00000613479 1221 ntBASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 AL162274.1-201ENST00000617191 1098 ntBASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 TEX28P2-201ENST00000617764 1221 ntBASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 AL591163.1-201ENST00000641757 987 ntBASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 AC087499.5-201ENST00000452760 1342 ntBASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM43Q96BQ3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 AC104794.3-201ENST00000566840 1248 ntBASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM43Q96BQ3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 AC105233.2-201ENST00000523697 349 ntBASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 AF228730.5-201ENST00000530288 346 ntBASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM43Q96BQ3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 AL512384.1-201ENST00000406683 331 ntBASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 RPL37AP1-201ENST00000412502 279 ntBASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 AC112492.5-201ENST00000421897 457 ntBASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 RN7SL752P-201ENST00000463779 287 ntBASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 AC120498.9-201ENST00000339021 3867 ntBASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM43Q96BQ3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms