Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
APH1AQ96BI3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
APH1AQ96BI3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.21■□□□□ 0.02
APH1AQ96BI3 AL023806.1-201ENST00000603994 1649 ntBASIC15.21■□□□□ 0.02
APH1AQ96BI3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.21■□□□□ 0.02
APH1AQ96BI3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
APH1AQ96BI3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
APH1AQ96BI3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 PI4KAP1-204ENST00000612579 1703 ntBASIC15.2■□□□□ 0.02
APH1AQ96BI3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 EGFEM1P-202ENST00000431685 1563 ntBASIC15.2■□□□□ 0.02
APH1AQ96BI3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 RPL13AP23-201ENST00000480739 586 ntBASIC15.2■□□□□ 0.02
APH1AQ96BI3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 AC008667.4-201ENST00000607370 168 ntBASIC15.2■□□□□ 0.02
APH1AQ96BI3 GGTLC5P-201ENST00000617623 998 ntBASIC15.2■□□□□ 0.02
APH1AQ96BI3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 ZNF259P1-201ENST00000407656 1365 ntBASIC15.2■□□□□ 0.02
APH1AQ96BI3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.2■□□□□ 0.02
APH1AQ96BI3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
APH1AQ96BI3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
APH1AQ96BI3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APH1AQ96BI3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APH1AQ96BI3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 AC104109.2-201ENST00000602919 1418 ntBASIC15.19■□□□□ 0.02
APH1AQ96BI3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
APH1AQ96BI3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APH1AQ96BI3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APH1AQ96BI3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APH1AQ96BI3 AC108751.1-201ENST00000490852 363 ntBASIC15.19■□□□□ 0.02
APH1AQ96BI3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 UNC93B6-202ENST00000528242 690 ntBASIC15.19■□□□□ 0.02
APH1AQ96BI3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 Z83851.2-201ENST00000609564 659 ntBASIC15.19■□□□□ 0.02
APH1AQ96BI3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APH1AQ96BI3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APH1AQ96BI3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
APH1AQ96BI3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
APH1AQ96BI3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
APH1AQ96BI3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APH1AQ96BI3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
APH1AQ96BI3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APH1AQ96BI3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APH1AQ96BI3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
APH1AQ96BI3 PP12613-201ENST00000424958 2230 ntBASIC15.19■□□□□ 0.02
APH1AQ96BI3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
APH1AQ96BI3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.18■□□□□ 0.02
APH1AQ96BI3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
APH1AQ96BI3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
APH1AQ96BI3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
APH1AQ96BI3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.18■□□□□ 0.02
APH1AQ96BI3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
APH1AQ96BI3 AC106820.2-201ENST00000563775 3264 ntBASIC15.18■□□□□ 0.02
APH1AQ96BI3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms