Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AL135999.2-201ENST00000622438 1686 ntBASIC19.37■□□□□ 0.69
SMARCE1Q969G3 AC009336.1-201ENST00000608941 1553 ntBASIC19.37■□□□□ 0.69
SMARCE1Q969G3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 BX276092.5-203ENST00000456199 560 ntBASIC19.37■□□□□ 0.69
SMARCE1Q969G3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 AL031133.1-201ENST00000406807 723 ntBASIC19.36■□□□□ 0.69
SMARCE1Q969G3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 CHCHD2P8-201ENST00000429873 447 ntBASIC19.36■□□□□ 0.69
SMARCE1Q969G3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 NTF6B-201ENST00000591913 560 ntBASIC19.36■□□□□ 0.69
SMARCE1Q969G3 AL121672.3-201ENST00000608644 468 ntBASIC19.36■□□□□ 0.69
SMARCE1Q969G3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.36■□□□□ 0.69
SMARCE1Q969G3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCE1Q969G3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.35■□□□□ 0.69
SMARCE1Q969G3 AC011467.2-201ENST00000598425 242 ntBASIC19.35■□□□□ 0.69
SMARCE1Q969G3 AL121956.5-201ENST00000625261 221 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms