Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX1Q92499 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
DDX1Q92499 AP002414.1-201ENST00000391405 1147 ntBASIC18.25■□□□□ 0.51
DDX1Q92499 AC098831.1-202ENST00000438821 336 ntBASIC18.25■□□□□ 0.51
DDX1Q92499 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX1Q92499 RPL13AP23-201ENST00000480739 586 ntBASIC18.25■□□□□ 0.51
DDX1Q92499 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DDX1Q92499 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.25■□□□□ 0.51
DDX1Q92499 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.25■□□□□ 0.51
DDX1Q92499 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.25■□□□□ 0.51
DDX1Q92499 AC008608.2-201ENST00000606089 416 ntBASIC18.25■□□□□ 0.51
DDX1Q92499 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.25■□□□□ 0.51
DDX1Q92499 TP73-AS1-207ENST00000624167 988 ntBASIC18.25■□□□□ 0.51
DDX1Q92499 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
DDX1Q92499 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
DDX1Q92499 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX1Q92499 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DDX1Q92499 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.25■□□□□ 0.51
DDX1Q92499 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX1Q92499 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
DDX1Q92499 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.25■□□□□ 0.51
DDX1Q92499 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX1Q92499 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DDX1Q92499 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX1Q92499 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX1Q92499 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.24■□□□□ 0.51
DDX1Q92499 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
DDX1Q92499 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DDX1Q92499 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DDX1Q92499 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.24■□□□□ 0.51
DDX1Q92499 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DDX1Q92499 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.24■□□□□ 0.51
DDX1Q92499 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.24■□□□□ 0.51
DDX1Q92499 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX1Q92499 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX1Q92499 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX1Q92499 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
DDX1Q92499 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.24■□□□□ 0.51
DDX1Q92499 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
DDX1Q92499 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DDX1Q92499 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
DDX1Q92499 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DDX1Q92499 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DDX1Q92499 PGAM5P1-201ENST00000518923 814 ntBASIC18.24■□□□□ 0.51
DDX1Q92499 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
DDX1Q92499 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
DDX1Q92499 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.24■□□□□ 0.51
DDX1Q92499 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX1Q92499 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.24■□□□□ 0.51
DDX1Q92499 AC027796.2-201ENST00000575326 344 ntBASIC18.24■□□□□ 0.51
DDX1Q92499 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.24■□□□□ 0.51
DDX1Q92499 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.24■□□□□ 0.51
DDX1Q92499 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
DDX1Q92499 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX1Q92499 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
DDX1Q92499 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.24■□□□□ 0.51
DDX1Q92499 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX1Q92499 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
DDX1Q92499 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
DDX1Q92499 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX1Q92499 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DDX1Q92499 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DDX1Q92499 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.23■□□□□ 0.51
DDX1Q92499 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX1Q92499 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX1Q92499 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.23■□□□□ 0.51
DDX1Q92499 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
DDX1Q92499 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX1Q92499 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.23■□□□□ 0.51
DDX1Q92499 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX1Q92499 PCDHB17P-201ENST00000539533 2393 ntBASIC18.23■□□□□ 0.51
DDX1Q92499 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
DDX1Q92499 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX1Q92499 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.23■□□□□ 0.51
DDX1Q92499 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX1Q92499 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX1Q92499 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
DDX1Q92499 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.23■□□□□ 0.51
DDX1Q92499 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
DDX1Q92499 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
DDX1Q92499 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DDX1Q92499 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.23■□□□□ 0.51
DDX1Q92499 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.23■□□□□ 0.51
DDX1Q92499 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX1Q92499 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
DDX1Q92499 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX1Q92499 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX1Q92499 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DDX1Q92499 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX1Q92499 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.23■□□□□ 0.51
DDX1Q92499 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DDX1Q92499 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX1Q92499 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.23■□□□□ 0.51
DDX1Q92499 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DDX1Q92499 NCF1C-201ENST00000438382 1427 ntBASIC18.23■□□□□ 0.51
DDX1Q92499 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
DDX1Q92499 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
DDX1Q92499 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.22■□□□□ 0.51
DDX1Q92499 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.22■□□□□ 0.51
DDX1Q92499 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms