Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 AC113410.3-201ENST00000623366 203 ntBASIC15.72■□□□□ 0.11
CNIH3Q8TBE1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CNIH3Q8TBE1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CNIH3Q8TBE1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNIH3Q8TBE1 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNIH3Q8TBE1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.72■□□□□ 0.11
CNIH3Q8TBE1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CNIH3Q8TBE1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNIH3Q8TBE1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.72■□□□□ 0.11
CNIH3Q8TBE1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CNIH3Q8TBE1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNIH3Q8TBE1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CNIH3Q8TBE1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNIH3Q8TBE1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CNIH3Q8TBE1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 AC024563.2-201ENST00000603282 481 ntBASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 AL391256.1-201ENST00000443260 1855 ntBASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CNIH3Q8TBE1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.71■□□□□ 0.1
CNIH3Q8TBE1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CNIH3Q8TBE1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CNIH3Q8TBE1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CNIH3Q8TBE1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CNIH3Q8TBE1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CNIH3Q8TBE1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CNIH3Q8TBE1 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CNIH3Q8TBE1 EGFEM1P-202ENST00000431685 1563 ntBASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 AC092384.3-202ENST00000564646 2873 ntBASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 ABHD17AP1-201ENST00000358206 933 ntBASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 UBE2SP1-201ENST00000450587 669 ntBASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 AP001412.1-201ENST00000608405 714 ntBASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNIH3Q8TBE1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNIH3Q8TBE1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms