Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 AP001094.4-201ENST00000579008 2176 ntBASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 AL590787.1-201ENST00000568856 1315 ntBASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 RPS2P28-201ENST00000314255 741 ntBASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 AL662844.1-201ENST00000546340 181 ntBASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 AC012640.2-201ENST00000561606 901 ntBASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 AP001005.1-201ENST00000571755 1248 ntBASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
LPCAT1Q8NF37 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 GPR89P-201ENST00000407924 1495 ntBASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 AP002414.3-201ENST00000589352 1468 ntBASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 AC105339.3-201ENST00000560043 636 ntBASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPCAT1Q8NF37 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 AC092053.1-201ENST00000605787 1936 ntBASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 AC026396.1-201ENST00000419388 421 ntBASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 KRT18P27-201ENST00000427733 1299 ntBASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 MIR1199-201ENST00000621445 119 ntBASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.3■□□□□ 0.36
LPCAT1Q8NF37 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms