Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AL596257.1-201ENST00000641463 2694 ntBASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 AC097374.2-201ENST00000618617 1306 ntBASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 AL662844.4-201ENST00000606367 2838 ntBASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNAAF1Q8NEP3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 AL359075.1-203ENST00000462729 1002 ntBASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 AC092068.3-201ENST00000587894 2016 ntBASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.15■□□□□ 0.02
DNAAF1Q8NEP3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 AL390719.2-201ENST00000606993 987 ntBASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DNAAF1Q8NEP3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms