Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 OR7E47P-204ENST00000575924 449 ntBASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 AC015911.4-201ENST00000588022 1070 ntBASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 AF228730.6-201ENST00000641497 218 ntBASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 AC084121.3-201ENST00000641716 218 ntBASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 AC105233.6-201ENST00000642093 218 ntBASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.41■□□□□ 0.22
ZNF248Q8NDW4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 REXO1L9P-201ENST00000604264 2108 ntBASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 INGX-202ENST00000489074 768 ntBASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 CXCL1P1-201ENST00000502804 216 ntBASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 AC093214.1-201ENST00000511688 1107 ntBASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 AC112191.1-201ENST00000523689 701 ntBASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 AC138028.4-201ENST00000564984 1845 ntBASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF248Q8NDW4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
ZNF248Q8NDW4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF248Q8NDW4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF248Q8NDW4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
ZNF248Q8NDW4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ZNF248Q8NDW4 AL096828.2-201ENST00000567259 1965 ntBASIC16.38■□□□□ 0.21
ZNF248Q8NDW4 AC097637.2-201ENST00000624096 1997 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms