Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSMEM1Q8N8F7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 ARMC10P1-201ENST00000313754 855 ntBASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 ACTG1P4-201ENST00000425123 1122 ntBASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 AC099336.1-202ENST00000602961 463 ntBASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 AC092119.3-201ENST00000612618 583 ntBASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 GPR89P-201ENST00000407924 1495 ntBASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 AC005052.1-201ENST00000625181 2492 ntBASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.75■□□□□ 0.11
LSMEM1Q8N8F7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 KRT16P4-201ENST00000453883 522 ntBASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.74■□□□□ 0.11
LSMEM1Q8N8F7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LSMEM1Q8N8F7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LSMEM1Q8N8F7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.73■□□□□ 0.11
LSMEM1Q8N8F7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LSMEM1Q8N8F7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LSMEM1Q8N8F7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LSMEM1Q8N8F7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LSMEM1Q8N8F7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LSMEM1Q8N8F7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LSMEM1Q8N8F7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LSMEM1Q8N8F7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LSMEM1Q8N8F7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
LSMEM1Q8N8F7 AC148477.5-201ENST00000625164 1645 ntBASIC15.73■□□□□ 0.11
LSMEM1Q8N8F7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.73■□□□□ 0.11
LSMEM1Q8N8F7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms