Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PRORSD1P-202ENST00000563365 2154 ntBASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 AC133963.1-201ENST00000504166 1679 ntBASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 AC008764.6-201ENST00000595909 2069 ntBASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM48Q8IWZ4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 AL135999.2-201ENST00000622438 1686 ntBASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 ACTG1P4-201ENST00000425123 1122 ntBASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 RPS15P9-201ENST00000494093 319 ntBASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM48Q8IWZ4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 AL591424.1-201ENST00000442569 1213 ntBASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 AC009947.1-201ENST00000444350 727 ntBASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 AC034105.1-201ENST00000563488 319 ntBASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 MIR4751-201ENST00000578027 74 ntBASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 AL353135.1-201ENST00000606729 504 ntBASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM48Q8IWZ4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms