Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 UPF3AP3-201ENST00000420996 769 ntBASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 AC004877.2-201ENST00000623941 599 ntBASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 AL138688.1-201ENST00000624851 1594 ntBASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 AC002310.6-201ENST00000624451 1377 ntBASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 RPSAP43-201ENST00000402237 625 ntBASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 GPX1P2-201ENST00000429271 606 ntBASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 AC112482.1-201ENST00000492080 688 ntBASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 SLC25A6P2-201ENST00000497974 877 ntBASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 CXCL1P1-201ENST00000502804 216 ntBASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 AC096734.2-201ENST00000562054 433 ntBASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 MTDHP5-201ENST00000598980 586 ntBASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 AC016396.2-201ENST00000562575 1417 ntBASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCN4BQ8IWT1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SCN4BQ8IWT1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 AC093525.9-201ENST00000624961 1746 ntBASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.04■□□□□ 0.48
SCN4BQ8IWT1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms